ywmE [2019-06-12 10:39:55]

general stress protein, survival of ethanol stress

locus: BSU36720

pI: 11.01

mw: 5.76 kDa

protein length: 53 aa

gene length: 162 bp

function: survival of ethanol stress

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 3,774,400 3,774,561

The protein

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|48FD89034CBA111265456CBD366C141226335938|ywmE]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

Biological materials

Mutant

• MGNA-A192 (ywmE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/192 NBRP B. subtilis, Japan]
• BKE36720 ([gene|48FD89034CBA111265456CBD366C141226335938|ywmE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTTCAACCCCTTTTT, downstream forward: _UP4_TAGAGTCCTTTATACAGAGG
• BKK36720 ([gene|48FD89034CBA111265456CBD366C141226335938|ywmE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36720 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATGTTCAACCCCTTTTT, downstream forward: _UP4_TAGAGTCCTTTATACAGAGG

References

• 15805528,23033921